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• Usage of all workstations must be scheduled through Internal Services => "Advanced Light Microscopy" service. For Internal services and room entrance authorization, please contact Sefi Addadi or Ofra Golani
• We provide 3 two categories of Workstations
  
  • Lightsheet General WS: are only mainly for users who acquire data acquired using the Lightsheet Z1 and , Ultra Microscope (unless coordinated with us otherwise for specific needs): 20T , 20T2 and 30TGeneral WS: are mainly for users who acquire data on the other Cell Observatory microscopes or use our Image analysis service (Levine 209 WS1, UK2 WS1 and UK2 WS2) 
  • Remote-only WS: intended for remote usage and can be used by all authorized users for image analysis tasks (80T Maldives )
• The operating system allows multiple remote users (except for Levine 209 WS1). However, priority is given to the person who scheduled work through internal services. If you log in as a second user, you SHOULD NOT use heavy-load software without coordinating with the scheduled person.

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General Workstations

• Only data acquired on the Lightsheet microscopes can be stored on the gpfs disk (ESS). No other data is allowed on this gpfs disk !!!
• For Data organization on the ESS, please refer to ESS Guidelines

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General Workstations

• Intended for use mainly by users who acquired data on the Cell Observatory microscopes or use our image analysis service (unless coordinated with us otherwise for specific needs)
• User's data should be stored in a subfolder named by your WIS userid under D:\UserData \\lscf-storage\data ( so for the user XYZ it will be D:\UserData\xyz\lscf-storage\data\xyz ) - and not on the desktop or any other location. We can help you make it a shared folder for remote folder access.
• You can store the data on the disk for the analysis period, but data must be deleted within 2 weeks after the analysis is done.
• The data is not backup.

Remote-Only WS

• Maldives WS 80T does not have a screen. It is intended for remote usage and can be used by all authorized users (not necessarily for data acquired at the Cell Observatory)
• Only data acquired on the Lightsheet microscopes can be stored on the ESS (gpfs). No other data is allowed on this gpfs disk !!! 
• User's data (not acquired using Lightsheet) should be stored in a subfolder named by your WIS userid under D:\UserData \\lscf-storage\data ( so for the user XYZ it will be D:\UserData\xyz\\lscf-storage\data\xyz ) - and not on the desktop or any other location. We can help you make it a shared folder for remote folder access.
• You can store the data on the disk for the analysis period, but data must be deleted within 2 weeks after the analysis is done.
• The data is not backup.

Image Analysis Workstations Configuration

Available Software

Fiji, CellProfiler, Ilastik, QuPath, Matlab, 

Imaris, Arivis (Lightsheet WS only) , ZEN, LasX (General WS only, Huygens(Bora workstation), Huygens, AutoQuant,

PanoramicViewer, CaseViewer (General WS only),

Amira, Avizo: upon request

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