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Our Courses and Workshops
“Incorporating Machine learning tools into image analysis workflows using Fiji Ilastik and Stardist” Workshop
Here is all the Workshop Material including Presentation, detailed Exercises, related Scripts and Sample data (May 2023)
“Image Analysis with QuPath” Workshop
Here is all the Workshop Material including Presentation, detailed Exercises, related Scripts and Sample data (March 2023).
It is also available on our Github (except for the full slide image, which is too big)
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“Practical Image Analysis for Biology” Course
We teach between 2015-2019 we taught once a year a course on "Practical Image Analysis for Biology" at the Feinberg School at Weizmann
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Online Courses and Image Analysis Training Material
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MOOC on Bioimage Analysis by the EPFL team (You need to enroll, but it is free) |
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Introduction to BioImage Analysis with Fijiby Robert Haase, from Biotechnology Center of the TU Dresden and center for systems biology Dresden, which include also ImageJ macro-writing lectures. It is a course in process, so lectures are added every week. (videos, slides, catch-up code) |
iBiology BioImage Analysis Course (videos)
Course material on Introduction to Image Analysis, mainly focused on Fiji by the Scientific Computing Facility (SCF) of the Max Planck Institute for Cellular Biology and Genetics (MPI-CBG) in Dresden
Image Analysis with Fiji, Intermediate Image Analysis by Jeremey Pike
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Image Processing with Python course by Guillaume Witz and David Haberthür from Science IT Support unit at Bern University
Python for BioImage Analysis course organized by Dominic Waithe, Gabriella Rustici, Chas Nelson and Stephen Cross
Python for Microscopists videos by Sreeni
Napari
Napari: https://www.youtube.com/watch?v=VgvDSq5aCDQ
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